Sintesis dan Studi In Silico Senyawa 3‐(4‐Heptylbenzoyl)‐1‐[3‐({[(4- Heptylphenyl) Formamido] Methanethioyl} Amino) Propyl] Thiourea Sebagai Kandidat Antikanker
Keywords:
synthetis, in silico study, thioureaAbstract
Background: Cancer is a deadly disease and the highest cause of death in the world after heart disease. The high number of cancer cases that occur and the many side effects caused by chemotherapy treatment in cancer require development in cancer treatment. Objective: This study aims to determine whether the compound 3-(4-Heptylbenzoyl)-1-[3-({[(4-Heptylphenyl) Formamido] Methanethioyl}Amino)Propyl]Thiourea can be synthesized from 4-Heptilbenzoyl Chloride, KSCN, 1,3- Diaminopropane and to see its interaction with PDK1 receptor. Methods: Compounds synthesized by sonication method were characterized then followed by in silico studies, pharmacokinetic and toxicity prediction. Results: The synthesis results obtained %yield of 87%. Characterization of the synthesized compound is shown by the melting distance of 2o C (79-81o C) and a single stain on the TLC plate, the maximum wavelength of 241 nm, has -NH, C=O, and C=S absorption at wave numbers 3292 cm-1, 1729 cm-1, and 1154 cm-1, and with a molecular weight of 597 g/mol. The results of in silico studies showed that the compound 3-(4-Heptylbenzoyl)-1-[3-({[(4-Heptylphenol)Formamido]Methanethioyl} Amino) Propyl] Thiourea has a good interaction with the PDK1 receptor (PDB: 5LVO) with a binding affinity value of -6.96 kcal/mol which is lower than the comparator drug Capecitabine, and has a better pharmacokinetic and toxicity profile. Conclusion: The results of this study indicate that the compound 3-(4-Heptylbenzoyl) -1-[3-({[(4-Heptylphenyl) Formamido] Methanethioyl} Amino) Propyl] Thiourea has potential as an anticancer candidate.
References
Agrawal, P., Singh, H., Srivastava, H. K., Singh, S., Kishore, G., & Raghava, G. P. S. (2019). Benchmarking of different molecular docking methods for protein- peptide docking. BMC Bioinformatics, 19(Supp13). https://doi.org/10.1186/s12859-018- 2449-y
Abdullah, S. S., Putra, P. P., Antasionasti, I., Rundengan, G., Suoth, E. J., Abdullah, R. P. I., & Abdullah, F. (2021). ANALISIS SIFAT FISIKOKIMIA, FARMAKOKINETIK DAN TOKSIKOLOGI PADA PERICARPIUM PALA (Myristica fragransa) SECARA ARTIFICIAL INTELLIGENCE. Chemistry Progress, 14(2), 81. https://doi.org/10.35799/cp.14.2.2021.37 112
Akbar, N.A., Amin, S.,& Wulandari, W. T. (2022). STUDI IN SILICO SENYAWA YANG TERKANDUNG DALAM TANAMAN DAUN SIRIH MERAH (Pipercrocatum RUITZ & PAV) SEBAGAI KANDIDAT ANTI SARS CoV-2. Ejurnal Universitas Bth, 2, 378–391. https://repository.universitas- bth.ac.id/2246/%0Ahttps://repository.univ ersitas-bth.ac.id/2246/3/DAFTAR PUSTAKA.pdf
Arafa, W. A. A., Ghoneim, A. A., & Mourad, A. K. (2022). N-Naphthoyl Thiourea Derivatives: An Efficient Ultrasonic- Assisted Synthesis, Reaction, and In Vitro Anticancer Evaluations. ACS Omega, 7(7), 6210–6222. https://doi.org/10.1021/acsomega.1c067 18
Hermansyah, O., Salsabila, F. J., Pertiwi, R., Versita, R., & Ikhsan, I. (2022). Studi in Silico Senyawa Tumbuhan Famili Asteraceae Sebagai Penghambat Enzim Xantin Oxidase. Pharma Xplore Jurnal Ilmiah Farmasi, 7(2), 70–79. https://doi.org/10.36805/jpx.v7i2.2942
Imanudin, N., Kurniawan, M. F., & Rohmayanti, T. (2022). Potensi Senyawa Aktif Ekstrak Kayu Manis Padang (Cinnamomum burmanii) sebagai Inhibitor Enzim Aldose Reductase secara Moleculer Docking. JRST (Jurnal Riset Sains Dan Teknologi), 6(2), 171.
https://doi.org/10.30595/jrst.v6i2.14262
Kelutur, F. J., Mustarichie, R., & Umar, A. K. (2020). Virtual Screening Kandungan Senyawa Kipas Laut (Gorgonia mariae) sebagai Anti-Asma. ALCHEMY Jurnal Penelitian Kimia, 16(2), 48. https://doi.org/10.20961/alchemy.16.2.39 965.48-59
Kesuma, D., Siswandono, S., Purwanto, B. T., & Hardjono, S. (2018). Uji in silico Aktivitas Sitotoksik dan Toksisitas Senyawa Turunan N-(Benzoil)-N’- feniltiourea Sebagai Calon Obat Antikanker. JPSCR : Journal of Pharmaceutical Science and Clinical Research, 3(1), 1. https://doi.org/10.20961/jpscr.v3i1.16266
Khasanah, N. U., Wardani, G. A., & Mardianingrum, R. (2023). Jurnal Kimia Sains dan Aplikasi 3-Phenylthiourea ) Cobalt ( III ) as Anticancer Candidate. 26(7), 238–248.
Mardiana, M., & Ruswanto. (2019). Simulasi Dinamika Molekular Senyawa Pyridin Pada Protein 2XNB. Research Gate, 9(5), 1–15.
Marselia, A., Wahdaningsih, S., & Nugraha, F. (2021). Analisis gugus fungsi dari ekstrak metanol kulit buah naga merah (Hylocereus polyrhizus) menggunakan FT-IR. Jurnal Mahasiswa Farmasi Fakultas Kedokteran UNTAN, 5(1), 1–5.
Mohimani, H., Gurevich, A., Mikheenko, A., Garg, N., Nothias, L.-F., Ninomiya, A., Kentaro Takada, P. C. D., & Pevzner, P.
A. (2017). Molecular dynamics for all. Physiology & Behavior, 176(3), 139–148. https://doi.org/10.1016/j.neuron.2018.08. 011.Molecular
Narmani, A., & Jafari, S. M. (2021). Chitosan- based nanodelivery systems for cancer therapy: Recent advances. Carbohydrate Polymers, 272(May), 118464. https://doi.org/10.1016/j.carbpol.2021.11 8464
Pagarra, H. (2022). SEKUNDER EKSTRAK ETANOL DAUN KAYU JAWA Lannea coromandelica. 5(September 2022), 161–
168.
Prasetiawati, R., Suherman, M., Permana, B., & Rahmawati, R. (2021). Molecular Docking Study of Anthocyanidin Compounds Against Epidermal Growth Factor Receptor (EGFR) as Anti-Lung Cancer. Indonesian Journal of Pharmaceutical Science and Technology, 8(1), 8. https://doi.org/10.24198/ijpst.v8i1.29872
Ploskonos, M. V., Syatkin, S. P., Neborak, E. V., Hilal, A., Sungrapova, K. Y., Sokuyev, R. I., Blagonravov, M. L., Korshunova, A. Y., & Terentyev, A. A. (2020). Polyamine analogues of propanediamine series inhibit prostate tumor cell growth and activate the polyamine catabolic pathway. Anticancer Research, 40(3), 1437–1441. https://doi.org/10.21873/anticanres.1408 5
Ruswanto, R., Nofianti, T., Mardianingrum, R., & Lestari, T. (2018). Desain dan Studi In Silico Senyawa Turunan Kuwanon-H sebagai Kandidat Obat Anti-HIV. Jurnal Kimia VALENSI, 4(1), 57–66. https://doi.org/10.15408/jkv.v4i1.6867
Ruswanto, R., & Nugraha, A. (2015). Sintesis Senyawa 1-(4-Hephtilbenzoil-3- Metiltiourea) Dan Uji Sitotoksisitas Terhadap Sel T47D Sebagai Kandidat Antikanker. Jurnal Kesehatan Bakti Tunas Husada: Jurnal Ilmu-Ilmu Keperawatan, Analis Kesehatan Dan Farmasi, 14(1), 145.
Ruswanto, R., Sarwatiningsih, Y., Pratita, A. T. K., Indra, & Dewi, R. (2019). Synthesis and Characterization of Fe(III) Complex with N’- (3- Nitrobenzoyl)Isonicotinohydrazide as an Anti-tuberculosis Candidate. Journal of Physics: Conference Series, 1179(1). https://doi.org/10.1088/1742- 6596/1179/1/012136
Ruswanto, R. (2015). Sintesis Dan Analisis Spektrum Senyawa 3-Benzoil-1- Feniltiourea Serta Uji Interaksinya Pada Reseptor Kanker. Jurnal Kesehatan Bakti Tunas Husada: Jurnal Ilmu-Ilmu Keperawatan, Analis Kesehatan Dan Farmasi, 12(1), 177.
https://doi.org/10.36465/jkbth.v12i1.77
Ruswanto, R., Mardianingrum, R., Siswandono, S., & Kesuma, D. (2020). Reverse docking, molecular docking, absorption, distribution, and toxicity prediction of artemisinin as an anti-diabetic candidate. Molekul, 15(2), 88–96. https://doi.org/10.20884/1.jm.2020.15.2.5 79
Ruswanto, R., Mardianingrum, R., & Yanuar, A. (2022). Computational Studies of Thiourea Derivatives as Anticancer Candidates through Inhibition of Sirtuin-1 (SIRT1). Jurnal Kimia Sains Dan Aplikasi, 25(3), 87–96. https://doi.org/10.14710/jksa.25.3.87-96 Ruswanto, R., Miftah, A. M., Tjahjono, D. H., & Siswandono. (2021). In silico study of 1- benzoyl-3-methylthiourea derivatives activity as epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor candidates. Chemical Data Collections, 34(36), 100741.
https://doi.org/10.1016/j.cdc.2021.10074 1
Ruswanto, R., Nofianti, T., Mardianingrum, R., Kesuma, D., & Siswandono. (2022). Design, molecular docking, and molecular dynamics of thiourea-iron (III) metal complexes as NUDT5 inhibitors for breast cancer treatment. Heliyon, 8(9). https://doi.org/10.1016/j.heliyon 2022.e10694
Ruswanto, R., Nofianti, T., Mardianingrum, R., & Lestari, T. (2018). Desain dan Studi In Silico Senyawa Turunan Kuwanon-H sebagai Kandidat Obat Anti-HIV. Jurnal Kimia VALENSI, 4(1), 57–66. https://doi.org/10.15408/jkv.v4i1.6867
Ruswanto, R., & Nugraha, A. (2015). Sintesis Senyawa 1-(4-Hephtilbenzoil-3- Metiltiourea) Dan Uji Sitotoksisitas Terhadap Sel T47D Sebagai Kandidat Antikanker. Jurnal Kesehatan Bakti Tunas Husada: Jurnal Ilmu-Ilmu Keperawatan, Analis Kesehatan Dan Farmasi, 14(1), 145. https://doi.org/10.36465/jkbth.v14i1.123
Ruswanto, R., Sarwatiningsih, Y., Pratita, A. T. K., Indra, & Dewi, R. (2019). Synthesis and Characterization of Fe(III) Complex with N’- (3- Nitrobenzoyl)Isonicotinohydrazide as an Anti-tuberculosis Candidate. Journal of Physics: Conference Series, 1179(1). https://doi.org/10.1088/1742- 6596/1179/1/012136
Ruswanto, R., Trisna Wulandari, W., Mardianingrum, R., & Cantika, I. (2021). Synthesis and virtual screening of bis-(4- (tert-butyl)-N-(methylcarbamothioyl) benzamide)-Iron (III) complex as an anticancer candidate. Pharmaciana, 11(1),1.
https://doi.org/10.12928/pharmaciana.v1 1i1.17837
Sari, I. W., Junaidin, J., & Pratiwi, D. (2020). STUDI MOLECULAR DOCKING SENYAWA FLAVONOID HERBA KUMIS KUCING (Orthosiphon stamineus B.) PADA RESEPTOR α-GLUKOSIDASE SEBAGAI ANTIDIABETES TIPE 2. Jurnal Farmagazine, 7(2), 54.
https://doi.org/10.47653/farm.v7i2.194
Suryani, Y., Taupiqurrohman, O., Rikani, A., & Paujiah, E. (2018). Insilico docking studies of daidzeion compounds as selective estrogen receptor modulator (SERMS) breast cancer. MATEC Web of Conferences, 197, 1–5. https://doi.org/10.1051/matecconf/20181 9703009
Wade, L. G., 2013, Organic Chemistry, Eighth Edition, Pearson Education, IL, Wahdaningsih, S., Nugraha, F., Kurniawan, H., Marselia, A., & Sari, D. N. (2022). Identifikasi Gugus Fungsi Fraksi Etil Asetat dan Fraksi n-Heksan Hylocereus polyrhizus (F.A.C.Weber) Britton & Rose. Jurnal Pharmascience, 9(1), 113. https://doi.org/10.20527/jps.v9i1.11192
Yahya, E. B., & Alqadhi, A. M. (2021). Recent trends in cancer therapy: A review on the current state of gene delivery. Life Sciences, 269(December 2020), 119087. https://doi.org/10.1016/j.lfs.2021.119087
Yualanda, V. G., Sary, I. P., & Pangaribowo, D. A. (2018). Sintesis dan Uji Aktivitas Antibakteri Senyawa N-Fenil-3,4- Diklorobenzamida (Synthesis and Antibacterial Activity Assay of N-Phenyl- 3,4-Dichlorobenzamide). Pustaka Kesehatan, 6(1), 5.